PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G42170.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 553aa MW: 61116.6 Da PI: 6.8639

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G42170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.3	1e-10	242	272	4	34
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 k err+++NReAAr+sR+RKka++++Le+ OGLUM01G42170.1 242 AKTERRLAQNREAARKSRLRKKAYVQNLETS 272 799*************************974 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MKGGYKEWIE LVVIMVQGEE SSWRMAASTH HERAIPLNQA LAYGVQAHAS PSVAAAPPAS 60 FLDFQPAAAA AAYFGELEEA LIHGANAGGV VDPGMIRADV HSKSAAAAAT AGYLAARPPT 120 LEIFPSWPMR QQQQLHSGNS QSVGSTTDSS SAQNTMPQME LVSPASIRAS SEHQHQQQQP 180 GQEVMMVTTD DYSYKPGLAA ASPSFQQQHQ LQHHQQQQLH GGGDHDKRKH GSTRKDGKSV 240 DAKTERRLAQ NREAARKSRL RKKAYVQNLE TSRVRLQQIE QELQRARSQG LFLGGCSAAG 300 DMSSGAAMFD MEYARWLDDD SKRLTDLRGG LQAHLLDTNL GLIVEECMQH YDELFQLKAA 360 LARSDVFHLL TGTWATPAER CFLWMGGFRP SDLLKILIQQ LDPLTEQQML GIYSLQQSSE 420 QAEEALAQGL QQLHQSLADT VAAGTLNDGP GVPNYMSLMA IALDKLASLE SFYQQADNLR 480 QQTLHQLRRI LTTRQAARCF LSIGEYYRRL RALSNLWSSR PRENFIGTES VSPTGTELQP 540 MHNQPQQNQY SGF

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MKGGYKEWIE LVVIMVQGEE SSWRMAASTH HERAIPLNQA LAYGVQAHAS PSVAAAPPAS  60
FLDFQPAAAA AAYFGELEEA LIHGANAGGV VDPGMIRADV HSKSAAAAAT AGYLAARPPT  120
LEIFPSWPMR QQQQLHSGNS QSVGSTTDSS SAQNTMPQME LVSPASIRAS SEHQHQQQQP  180
GQEVMMVTTD DYSYKPGLAA ASPSFQQQHQ LQHHQQQQLH GGGDHDKRKH GSTRKDGKSV  240
DAKTERRLAQ NREAARKSRL RKKAYVQNLE TSRVRLQQIE QELQRARSQG LFLGGCSAAG  300
DMSSGAAMFD MEYARWLDDD SKRLTDLRGG LQAHLLDTNL GLIVEECMQH YDELFQLKAA  360
LARSDVFHLL TGTWATPAER CFLWMGGFRP SDLLKILIQQ LDPLTEQQML GIYSLQQSSE  420
QAEEALAQGL QQLHQSLADT VAAGTLNDGP GVPNYMSLMA IALDKLASLE SFYQQADNLR  480
QQTLHQLRRI LTTRQAARCF LSIGEYYRRL RALSNLWSSR PRENFIGTES VSPTGTELQP  540
MHNQPQQNQY SGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-121	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G42170.1