PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G41000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | G2-like | ||||||||
Protein Properties | Length: 270aa MW: 27889.2 Da PI: 6.1606 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.4 | 3.8e-29 | 142 | 195 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++WtpeLH+rFveav++L G++ A+Pk+i++lm+v+gLt+e+v+SHLQkYRl OGLUM01G41000.1 142 KARMVWTPELHHRFVEAVAHL-GEKGAVPKAIVRLMNVDGLTRENVASHLQKYRL 195 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 47 | 6.1e-15 | 144 | 194 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+e++ ++v+av+ lG + +k+I r m+ g+t++++ s++qky+ OGLUM01G41000.1 144 RMVWTPELHHRFVEAVAHLGEKgaVPKAIVRLMNvDGLTRENVASHLQKYR 194 789***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MLSARGGRPH DADAPLPSSS SSSSSSSSSS SSPSRRMVDA AAASGDACGR VTEWETGLPA 60 PGEMTPVSHQ LVPPALAAAF GIDLAAVGVL LPSPSVDSPV SHLFFPVDED DDEDEEGEGE 120 GGNDDAPAAA AAGGGGGRCG KKARMVWTPE LHHRFVEAVA HLGEKGAVPK AIVRLMNVDG 180 LTRENVASHL QKYRLYLKRT RVAATPPPSP PPPPPPPPPL PPAMYVPCFA AKPPLDAANR 240 SDSPPSRTSD ATTKQNQVKP IKERAVSNAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05090.1 | 9e-29 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G41000.1 |