PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G40190.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NF-YB | ||||||||
Protein Properties | Length: 172aa MW: 18451.9 Da PI: 6.2699 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 176.3 | 3.1e-55 | 32 | 125 | 1 | 94 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 vreqdrflPian+srimkk++Pan+ki+kdaket+qecvsefisfvtseasdkcq+ekrkting+dll+a++tlGfe+yv+plk+yl+kyre + OGLUM01G40190.1 32 VREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREGD 125 69*****************************************************************************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MMMMDLGFLE GGAGMADAGH DESGSPPRSG GVREQDRFLP IANISRIMKK AVPANGKIAK 60 DAKETLQECV SEFISFVTSE ASDKCQKEKR KTINGEDLLF AMGTLGFEEY VDPLKIYLHK 120 YREGDSKLSS KAGDGSVKKD TIGPHSGASS SSAQGMVGAY TQGMGYMQPQ VT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 1e-65 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G40190.1 |