PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G39360.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 610aa    MW: 65717 Da    PI: 6.0956
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G39360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.96.4e-11353959
                     EEEEE--TT-SS-EEEEEE-STT---EEEEEE-S.SSTTEEEEEEES--SS- CS
             WRKY  9 KYGqKevkgsefprsYYrCtsagCpvkkkversa.edpkvveitYegeHnhe 59
                      YGqK++k+s fpr  Yr   ++C + k v++++ +dp +  +tY+ eH+++
  OGLUM01G39360.1  3 DYGQKNIKDSAFPRCSYR-EDRQCLASKLVQQENdDDPPLYRVTYTYEHTCN 53
                     6*************9999.5679*******987516899***********97 PP
2WRKY46.11e-14366419259
                      --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEE.E-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkve.rsaedpkvveitYegeHnhe 59 
                      +Dgy+WrKYGqK++++s++         ++C +kk+v+ r+a +p ++ +tY +eH+++
  OGLUM01G39360.1 366 KDGYQWRKYGQKNIQDSNY-----LSRERSCAAKKQVQqRDAGEPPMFLVTYLNEHTCQ 419
                      7***************984.....55678********7356789*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    
MKDYGQKNIK DSAFPRCSYR EDRQCLASKL VQQENDDDPP LYRVTYTYEH TCNTTPVPTP  60
DVVAEQPPPG AAGDAYLLRF GSSAGGGGGG GAHQQQTERE RQQQNTARRR PFMMLSFDSS  120
SSHQLHEQPH AFPPDGQLPA TAAAASPSSF TAAEALAAPP PAPPLTTTMN DGGDLFSTWD  180
ALRYGLDYDH GHLGNHGLLL KLESNNTHLK VLCTLAAQDN VHKTGEHSVQ YTTRVPQVSA  240
QIKMAFGQDT IEQLYRELAG GRRLSAKLQA LLEGPLDSRG QKEAVDVSRE LGRVFMVSLY  300
MLKPCSNSSR RPEGVTRTAP ETRTDDSICL HTPARVKRVR SEEVLVRNGR EEVVTRTEII  360
TPSPYKDGYQ WRKYGQKNIQ DSNYLSRERS CAAKKQVQQR DAGEPPMFLV TYLNEHTCQQ  420
PQAVPGTPNT AGSSPTTTSR QRQSSSSPPA EMLDLTMNGA GLFSRLLLPH AVGGGGSAAE  480
EEAAIVTCLA AVISGGGAAA APPPLIWPTS APEAAFVASA AGHSPSAADE SVADEAAAAQ  540
MADMDYCFGQ YDQSTFGAAA AADHRVLIGD DGDVQRVVAA RIADTVWPRY TRDTSAWETA  600
GTSSMRGSID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01900.16e-12WRKY family protein