PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G38810.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 343aa MW: 36753.2 Da PI: 10.1122

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G38810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	50.7	3.8e-16	273	323	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN +Lk + +el +++ OGLUM01G38810.1 273 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENVRLK-RQKELDELI 323 79***************************************9.666666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MGSQTMASKA GGGGVARRGG GRMRSLGRQG SMYSLTLDEV QSQLGEPLHS MNLDELLRSV 60 FPDGLAIADG AGAGAGATTS SQQHQPGSGL LRQGSITMPP ELSKKTVDEV WKGIQAAPKR 120 NAETGGGGGG RRRRERQPTL GEVTLEDFLV KAGVVTQGSL KELSDVGNVD PVGRGVTATG 180 TVDLAPGSHW IEQYKQQIAS TDAHHHGQQG VQGAYFPNRL VPQPLNVGPG AILEPSYSDG 240 QTSSGMIGGM SDSQTPGRKR GMSGDVADKL MERRQKRMIK NRESAARSRA RKQAYTNELE 300 NKVSRLEEEN VRLKRQKELD ELICAVPVPE PKYQLRRTSS ADF

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MGSQTMASKA GGGGVARRGG GRMRSLGRQG SMYSLTLDEV QSQLGEPLHS MNLDELLRSV  60
FPDGLAIADG AGAGAGATTS SQQHQPGSGL LRQGSITMPP ELSKKTVDEV WKGIQAAPKR  120
NAETGGGGGG RRRRERQPTL GEVTLEDFLV KAGVVTQGSL KELSDVGNVD PVGRGVTATG  180
TVDLAPGSHW IEQYKQQIAS TDAHHHGQQG VQGAYFPNRL VPQPLNVGPG AILEPSYSDG  240
QTSSGMIGGM SDSQTPGRKR GMSGDVADKL MERRQKRMIK NRESAARSRA RKQAYTNELE  300
NKVSRLEEEN VRLKRQKELD ELICAVPVPE PKYQLRRTSS ADF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	137	GRRRRERQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-72	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G38810.1