PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G35670.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 205aa MW: 22435.1 Da PI: 9.3533

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G35670.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.4	6.3e-38	101	156	4	59
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 + l+cprC s++tkfCy+nny+++qPr+fCkaC+ryWt+GGalrnvP+G+grrkn+ OGLUM01G35670.1 101 APLPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPIGAGRRKNR 156 5689**************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MAPAAGGFKL FGKVIMQCGV SEGTQDKAQG FVVAREKVEP EEEEEEEQRV PAAATSGQRA 60 SIKREAADRD EEQRQGGGDA AGQPTQRRLQ DSAEARAAAA APLPCPRCRS RDTKFCYFNN 120 YNVNQPRHFC KACHRYWTAG GALRNVPIGA GRRKNRPLGP LAVAHHHHHH RAAAGFVLGF 180 PNPSSPTSPS PVYTDRWPVT PDRPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34140.1	5e-33	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G35670.1