PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G35310.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family VOZ
Protein Properties Length: 557aa    MW: 62126.1 Da    PI: 5.0959
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G35310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ430.23.1e-1322584751217
              VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaa 93 
                      p p+afl+pkcalwdc+rpaqgse++qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vgip+cegaatakspwna+
  OGLUM01G35310.1 258 PVPAAFLRPKCALWDCPRPAQGSERWQDYCSMYHADLAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGIPVCEGAATAKSPWNAP 351
                      89*************************************9879*************************************************** PP

              VOZ  94 elfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187
                      elfdl ++ege+irewlffdkprrafesgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqps+s+ewhlyeyein++da+alyrle+
  OGLUM01G35310.1 352 ELFDLYIFEGESIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSNSYEWHLYEYEINDCDAFALYRLEF 445
                      ********************************************************************************************** PP

              VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217
                      k++d+kk+ak+k+++++l+++q++++rl+a
  OGLUM01G35310.1 446 KSSDAKKTAKSKLACNPLNEIQQQMVRLSA 475
                      ****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MGRGPAAGRS SAGAARHQQF RARAKTRVDD LQEMFSGLQS ARKEARSTDA AVLEAQLHQM  60
LREWRAELSQ GNNRELSDPP SETLRLLQLA AAEEEEDDAT SKLVEQQQQH PPSANQAHGH  120
PQAQGGQDMK PEPPEEAVAS PADLTVPQQP QSPGQGVLAS GGGMLAPAAA AVFHDQMYYV  180
NQELTVEDFL YDDNYKMYLP GYNSDVLNNL ESTGQLEYPQ FNLPQELPPN AYLDTSNCGQ  240
NAGDVFLHMS DLLNTMSPVP AAFLRPKCAL WDCPRPAQGS ERWQDYCSMY HADLAVKEEG  300
PPGTMPVIRP RGIDLKDGPL FAALSAKIQG KHVGIPVCEG AATAKSPWNA PELFDLYIFE  360
GESIREWLFF DKPRRAFESG NRKQRSLPDY NGRGWHESRK QVMKDFGGLK RSYYMDPQPS  420
NSYEWHLYEY EINDCDAFAL YRLEFKSSDA KKTAKSKLAC NPLNEIQQQM VRLSADSPVE  480
NKRSARSRTK ANPNDINSNI YLVQNTTVQG SIPNAYQAVS QPDQMTYLNG NVVYGPHLPY  540
GYSTERSDFY WSSNDGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-135VOZ family protein