PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G34330.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family C3H
Protein Properties Length: 225aa    MW: 25041.2 Da    PI: 6.6999
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G34330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.82.9e-0687112326
                      S---SGGGGTS..--TTTTT-SS-SS CS
          zf-CCCH   3 telCrffartG..tCkyGdrCkFaHg 26 
                       e+C++f+      C++G+ C+FaHg
  OGLUM01G34330.1  87 GEPCPDFRVAAraACPRGSGCRFAHG 112
                      5899999999999************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MAYETSSDHQ LAAAAEFLAA LQVHLAGAEA SSPTWGGRCA YDEDFMMYEF KVRRCPRSRA  60
HEWTSCPYAH PGEAARRRDP SHVTYTGEPC PDFRVAARAA CPRGSGCRFA HGTFETWLHP  120
SRYRTRPCRS GMLCARPVCF FAHNDKELRI VGDDAAAATP SPRSPFTTSE DSPPPSPMDM  180
KQIVLAMQQM DARKATRSVA PKTDMLQQEL EEDAPELGWV SDLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.17e-45C3H family protein