PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G32750.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 243aa MW: 25538.3 Da PI: 8.2945

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G32750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.2	4.6e-30	157	215	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk+s++pr+YYrC+++gC+vkk+ver+++dp++v+++Yeg Hnh OGLUM01G32750.1 157 LDDGYKWRKYGKKSVKNSPNPRNYYRCSTEGCNVKKRVERDKNDPRYVVTMYEGIHNHV 215 59********************************************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAAAAAGAST PFNFCRHGSH AEYDAVFSGS WMARRPSAAP HGGGASGSGS GSGYGAASYV 60 APTFGAAFRQ QHLDLLDYLS DDQGVPAPPP AAVPSASYVT PAPAMAPAEP VVPDAVAAAG 120 GYPRSVAAAA AAVAGEGRDR TTTDKIAFRT RSDDEILDDG YKWRKYGKKS VKNSPNPRNY 180 YRCSTEGCNV KKRVERDKND PRYVVTMYEG IHNHVCPGTV YYAAQDAASG RFFVAGISHP 240 DLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	2e-35	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G32750.1