PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G26760.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB_related | ||||||||
Protein Properties | Length: 78aa MW: 8897.91 Da PI: 7.6192 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.8 | 1.6e-10 | 33 | 71 | 4 | 44 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 +T+eE +l + +++ G++ W++Ia +++ gRt+k++ +w OGLUM01G26760.2 33 FTEEEKDLVFRMHRLVGNR-WELIAGRIP-GRTAKEVEMFW 71 9******************.*********.******98887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 78 aa Download sequence |
MDSSSGSQGK NSKTSDGCET KEVNNTAQNF VHFTEEEKDL VFRMHRLVGN RWELIAGRIP 60 GRTAKEVEMF WAVKHQNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01060.1 | 3e-22 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G26760.2 |