PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G20660.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 474aa MW: 51420.6 Da PI: 7.3947

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G20660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.9	6e-10	189	223	5	39
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 k rr+++NReAAr+sR+RKka+i++Le +L+ OGLUM01G20660.1 189 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLT 223 788*************************8655555 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MEGGRLGGAA ASASAAAAAA ADARGGMSGF AAPQHAIHTN LNNVQPTQVT DFGALAQSAG 60 FRIEDLANLS TNGLFNLKSN AHTIINDPLQ FENYVKSISP SNITTTATVT VVDPQTLVPQ 120 KGAQLNLVTI RTGNVENWGE STIADTSPRT DTSTDPDTDE RNQMVEQGQL AAPTASDSSD 180 RSKDKLDHKT LRRLAQNREA ARKSRLRKKA YIQNLESSRL KLTQIEQELQ RARQQGIFIS 240 TSSDQSHSAS GNGALAFDME YARWLEEHNK HINELRAAVN AHAGDNDLKS TVDSIMAHYN 300 EIFKLKGVAA KADVFHVLSG MWKTPAERCF MWLGGFRSSE LLKLLAGQLE PLTEQQLAGI 360 ANLQQSSQQA EDALSQGMEA LQQSLAETLA SGSLGPAGSS GNVANYMGQM AMAMGKLGTL 420 ENFLRQADNL RLQTLQQMQR ILTTRQSARA LLAISDYFSR LRALSSLWLA RPRE

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MEGGRLGGAA ASASAAAAAA ADARGGMSGF AAPQHAIHTN LNNVQPTQVT DFGALAQSAG  60
FRIEDLANLS TNGLFNLKSN AHTIINDPLQ FENYVKSISP SNITTTATVT VVDPQTLVPQ  120
KGAQLNLVTI RTGNVENWGE STIADTSPRT DTSTDPDTDE RNQMVEQGQL AAPTASDSSD  180
RSKDKLDHKT LRRLAQNREA ARKSRLRKKA YIQNLESSRL KLTQIEQELQ RARQQGIFIS  240
TSSDQSHSAS GNGALAFDME YARWLEEHNK HINELRAAVN AHAGDNDLKS TVDSIMAHYN  300
EIFKLKGVAA KADVFHVLSG MWKTPAERCF MWLGGFRSSE LLKLLAGQLE PLTEQQLAGI  360
ANLQQSSQQA EDALSQGMEA LQQSLAETLA SGSLGPAGSS GNVANYMGQM AMAMGKLGTL  420
ENFLRQADNL RLQTLQQMQR ILTTRQSARA LLAISDYFSR LRALSSLWLA RPRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06950.4	1e-148	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G20660.1