PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G20420.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | GeBP | ||||||||
Protein Properties | Length: 509aa MW: 55611.4 Da PI: 8.0087 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 43 | 1.3e-13 | 257 | 347 | 3 | 97 |
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 f+r w+ +Dei++L +l+d + g p++ f+e v++ ++++s++ eK+r+LK+++++ v +++k+hd + els i OGLUM01G20420.1 257 FRRKWNGNDEIMILEALVDQIRSGGNVPQEpGHPLFHELVQRLEGRTFNHSDVREKVRSLKRRYNDVVLS-----GLAITKDHDLQLHELSCEI 345 899*****************999999998845556777777777789********************999.....789**************** PP DUF573 96 Wg 97 Wg OGLUM01G20420.1 346 WG 347 *8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 509 aa Download sequence |
MRRRSPPPAA AQPPRPPTRA AESGEEDGDP GKDEVAAPPK GDSALPRSGS GFGSGNAAAP 60 DGPAKSPMKP KKRVTAPPSS DHGSRENLAA GSPSNEVPAP QGDDAAQEDD LPESPPKSKK 120 NRKKKKKALR AGDSGKVAAP DDPAEPTRPQ QDVGEVDGRL AESEQEVPPN AGKAKKKASA 180 QARKKPSAKQ HAAAQEEEDG DLMAEAEEEV APRQGDEEDG KGPLPQRKSK RVAALSGSIC 240 PPDPKRAKIV DAQKPGFRRK WNGNDEIMIL EALVDQIRSG GNVPQEPGHP LFHELVQRLE 300 GRTFNHSDVR EKVRSLKRRY NDVVLSGLAI TKDHDLQLHE LSCEIWGRSV AHAGDDKQRC 360 LARDEQSSLA RDEQKSFAGD EEKSLARDEQ SSLARDEQKS FARDEKSLAR DEEKSLASDE 420 QRSFDDMCKQ FPLLAKEIKV LMEGQPAIME LFPRLDGDQV VAIEKKLENL RWIDMKRKKK 480 MAVKMAKIRK GLIYKLEGAA ILADGNMIH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 119 | 127 | KKNRKKKKK |
2 | 173 | 185 | KAKKKASAQARKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 2e-07 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G20420.1 |