PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G14210.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 301aa MW: 32736.8 Da PI: 5.9944

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G14210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	235	268	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+++gL+ +q+ +WF N+R ++ OGLUM01G14210.1 235 WPYPTEEDKLRLAARTGLDPKQINNWFINQRKRH 268 59*****************************885 PP
2	ELK	33.2	1.2e-11	188	209	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ OGLUM01G14210.1 188 ELKEMLLKKYSGCLSRLRSEFL 209 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MEDLYSIHPG ISRVGGAASE ASGVGVVVGG GGGSSSSDLT ELMKAQIAGH PRYPTLLSAY 60 IECRKVGAPP EVASLLEEIG RERRAGGGGG GAGQIGVDPE LDEFMEAYCR VLVRYKEELS 120 RPFDEAASFL SSIQTQLSNL CSGATSPPAT TATHSDEMVG SSDEDQCSGE TDMLDIGQEQ 180 SSRLADHELK EMLLKKYSGC LSRLRSEFLK KRKKGKLPKD ARSALLEWWN THYRWPYPTE 240 EDKLRLAART GLDPKQINNW FINQRKRHWK PSDGMRFALM EGVAGGSSGT TLYFDTGTIG 300 P

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	213	LRSEFLKKRK
2	210	214	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-78	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G14210.1