PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G12710.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 491aa MW: 52908.4 Da PI: 7.2651

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G12710.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.4	1.5e-38	111	171	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCy+nny+++qPr+fC++C+ryWt+GGa+rnvPvG+grr+nk++s OGLUM01G12710.1 111 PDKILPCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRRRNKHVS 171 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MAALRQGDDP AIKLFGRTIP LLLDPAAAAA AAAADEVMPN LGNGVKTNND LPLVSDKLLI 60 VKGIPFCPNN SKKNDLQGIS RPDGRIEIDS MTEDVKTEPD GSVPEKILKK PDKILPCPRC 120 NSMETKFCYF NNYNVHQPRH FCRNCQRYWT AGGAMRNVPV GAGRRRNKHV SKYRQAMMTC 180 NNTVAPGDVS DVVHHQVITH GSSLLPATLK ENETPTEFIS EVPPCKSSAS ILDIGEPNDT 240 DLVPLASGDN KEEKSCASYV VVSSCSENLM PDNAIMKEPN NRSGCCNGVA LPFPTGPALV 300 LPWSLGWNSV ALMPATQCST QPVLGLKDGI PCPPSWPPQL MVPAPGICTP VVPIPLVPPL 360 WSCFPGWPNG MWNAQCPGGN TTVLPSTAPN KISCSGSSSL VLGKHSREES LQEEEKTRNY 420 LWVPKTLRID DPAEAAKSSI WATLGIKPDD KGIFKSFQPN VAKNGTAPES PQALQANPAA 480 FSRSQSFQET T

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MAALRQGDDP AIKLFGRTIP LLLDPAAAAA AAAADEVMPN LGNGVKTNND LPLVSDKLLI  60
VKGIPFCPNN SKKNDLQGIS RPDGRIEIDS MTEDVKTEPD GSVPEKILKK PDKILPCPRC  120
NSMETKFCYF NNYNVHQPRH FCRNCQRYWT AGGAMRNVPV GAGRRRNKHV SKYRQAMMTC  180
NNTVAPGDVS DVVHHQVITH GSSLLPATLK ENETPTEFIS EVPPCKSSAS ILDIGEPNDT  240
DLVPLASGDN KEEKSCASYV VVSSCSENLM PDNAIMKEPN NRSGCCNGVA LPFPTGPALV  300
LPWSLGWNSV ALMPATQCST QPVLGLKDGI PCPPSWPPQL MVPAPGICTP VVPIPLVPPL  360
WSCFPGWPNG MWNAQCPGGN TTVLPSTAPN KISCSGSSSL VLGKHSREES LQEEEKTRNY  420
LWVPKTLRID DPAEAAKSSI WATLGIKPDD KGIFKSFQPN VAKNGTAPES PQALQANPAA  480
FSRSQSFQET T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	4e-63	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G12710.1