PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G08910.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 375aa    MW: 39874.4 Da    PI: 4.5451
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G08910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19143193155
              AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ++++GVr+++ +g+++AeIrd +     r  r++lg+f+taeeAak ++ a+ +l+g
  OGLUM01G08910.1 143 PRFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTFDTAEEAAKVYDTAAIQLRG 193
                      689*******.**********88.....55*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MEEEGFVALK RTEHVEVTSL AVAVEATPSA KGGKGKVVVG GGGAGGGVGP TRVRVFCDDF  60
DATDSSSDED EEEEVTARRR VKRYVQEIRL QRAAAVAVPP VKVKGEEVFP AAVSAKMAEA  120
AKARVVLAVG RKRKAGGVDG AEPRFRGVRR RPWGKYAAEI RDPWRRVRVW LGTFDTAEEA  180
AKVYDTAAIQ LRGRDATTNF NQSGDSASLD VPPEVAERVP QPPGASKNAS PATSYDSGEE  240
SHAAAASPTS VLRSFPPSAV VATADTANKK QPPPPPLVVR ETDESVDVFG CSFSDDGGFA  300
GELPPLYTDF DLLADFPEPP LDFLSNLPVE PFSLAPFSSN NGSPDLHLDD APSPAAAQVD  360
DFFQDITDLF QIPVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-29ERF family protein