PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM01G05410.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 509aa MW: 53266 Da PI: 5.9487 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.2 | 1.3e-31 | 268 | 323 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++ LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ OGLUM01G05410.1 268 KARRCWSPELHRRFVNALQILGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 323 68****************************************************97 PP | |||||||
2 | Myb_DNA-binding | 41 | 4.3e-13 | 270 | 321 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v+a + lGg t+k I + m g+t ++ks++qky+ OGLUM01G05410.1 270 RRCWSPELHRRFVNALQILGGAqvaTPKQIRELMKvDGLTNDEVKSHLQKYR 321 568*****************99*****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 509 aa Download sequence |
MASSSSDLTL DDHHHLTAVA AASGQATQKL QEFLSRLEEE RLKIDAFKRE LPLCMQLLNH 60 AMEAYRQQLE AYQMGSQHGA AAAAAARAPL VLEEFIPVKN IGIDVVAADK AAAAAAGGNS 120 VSSEKASWMV SAQLWNAPAS ASAADTAAKG PQTPKEHSEH HPLDTSPKLI TALDGGGGGG 180 AFLPFSKDNA MGDGSAAAAA AALPELALAP AEKAADAITI AAGEVDKKPY AHDNGVVARS 240 REAQNGGKPP STPPDGQAVP PPPQPHRKAR RCWSPELHRR FVNALQILGG AQVATPKQIR 300 ELMKVDGLTN DEVKSHLQKY RLHTRRPMPS PAPPTAATPQ LVVLGGIWVQ PEYATQAAGP 360 AIYGAHPATQ PHYTAAVAAQ EYYHHHHHHL QHHPAAAALV HHRAVAPPPP LPPQQQLAPP 420 YSAKSSASAR LGSPDSDGRG SGGGAAAAAS GAGRDMSESI EEEGEGEERE DDDDYDEMAA 480 TNNAHAVDGD DDDDEINTTT TTSAGAINY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G03500.1 | 7e-39 | G2-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM01G05410.1 |