PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OGLUM01G02200.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 338aa MW: 36542.7 Da PI: 4.5579 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.8 | 4.7e-12 | 114 | 157 | 1 | 49 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaa 49 ++y+GVr +k +g+W+AeIr + + r +lg+f ta+ A +a+ + OGLUM01G02200.1 114 TCYRGVRLRK-WGKWAAEIRNpF-----TgHREWLGTFVTADAASAAY-QS 157 68******99.**********55.....45999*******55555555.43 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 338 aa Download sequence |
MAPSKQQQML LKKVMAKKPK TKRLSGFGLK PSAAFSRPHV PSAAASLQPS RRVRVVFEDP 60 DATDSDSDDD EDAGAASKKR YFELFIGKPA SSMKQASPAS TVAAYANIGK VGSTCYRGVR 120 LRKWGKWAAE IRNPFTGHRE WLGTFVTADA ASAAYQSASR NFAEEKRRRG VASSASPASS 180 ATPTPTASSS SSTSAAPFAH PSPSSVLEAT KPAPKPESPP LPEQAATPLL VEATNETAEL 240 PDDPEFYKDI LRGLQLPDID PMDFRAGLDA LDISDVPAYM NGEQDVLFTE DMLLGDFAEE 300 DDLDLDDIGD DFCEDFPEIP SGYDFGRGDM FRQVDFCV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G14230.3 | 9e-11 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OGLUM01G02200.1 |