PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu064836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 185aa MW: 21159.1 Da PI: 9.017 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 104.5 | 9.1e-33 | 9 | 106 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 aCa+Ck++r+kC+++C+lap fp +++++f+ vhk+FG+s+v+k++ +l+ee+r++a++sl++eA +r++dPv G +g ++++ ++l+ +++ +++ Oeu064836.1 9 ACASCKHQRKKCTEKCILAPFFPVDKTREFQGVHKVFGVSKVTKIVMNLEEEDRKRAVDSLIWEAFCRQKDPVLGPYGEYRRVCEELRLYQSQYLQIQ 106 7**************************************************************************************99998765544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MQKANGTSAC ASCKHQRKKC TEKCILAPFF PVDKTREFQG VHKVFGVSKV TKIVMNLEEE 60 DRKRAVDSLI WEAFCRQKDP VLGPYGEYRR VCEELRLYQS QYLQIQQVQN QFKAAAQGLM 120 GWNSNKFMSY NSAEINNNNV DNNSSLNIQE THKLRGERDN SSALIMPPLH LPNGFNQQYF 180 FTGI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06280.1 | 5e-46 | LBD family protein |