PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu064696.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 178aa MW: 19991.9 Da PI: 5.641 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128 | 4.4e-40 | 10 | 106 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +CaaCk+lrr+C+kdC++ pyfp ++p+kfa+vh++FGasn++k+l+++p ++r da+ slvyeA r+++PvyG++g+i++lq q+ ql++el+++ Oeu064696.1 10 PCAACKLLRRRCTKDCIFLPYFPPSEPQKFAAVHRVFGASNISKMLQEIPVHDRGDAAMSLVYEATTRLKEPVYGCAGFISSLQMQILQLQSELNEA 106 7********************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MESYSKNIMP CAACKLLRRR CTKDCIFLPY FPPSEPQKFA AVHRVFGASN ISKMLQEIPV 60 HDRGDAAMSL VYEATTRLKE PVYGCAGFIS SLQMQILQLQ SELNEALAET VTLKTQLANA 120 LSIIISSQEG YQLNHITEKN NYNLIDYQQL RECNINENAS CTRLLDLPVT DSDLEHM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 9e-44 | LBD family protein |