PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu064601.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 332aa    MW: 38225.9 Da    PI: 6.5153
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu064601.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.73.6e-141152344
                 --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
       SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                 i+ +  r++tf kR++g++ K +E  +LCd+ +++ii+ +t+
  Oeu064601.1 11 ISKEKSRNITFKKRKEGLMRKMHEFTTLCDVSACMIIYPPTQ 52
                 888999********************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MGRAKLNMEL ISKEKSRNIT FKKRKEGLMR KMHEFTTLCD VSACMIIYPP TQDKNTVEPE  60
IWPQNLEETR RIIDIYENKK KDSGNKTYGL SDFFNERNQK IEDELEKLRN KNKEAKYPTW  120
IKLMDELSEI QLREFYALLS NKAEYVKSRI EMLKRNANEF DMNMMDLGHG RLIQSGIGLE  180
MINQQAISSM KPIEMHVPIH YPSIDHHQDM HSVNQNSMMM LLMNDNDYLQ FGGASNGSNV  240
QCASCKRQVF YESTAAAELG VVDNVMCHNP VPLARYYAVA PPVLPPVPPP YVQCAVMPGI  300
APPQLNSLKE SDEQDDVLQY QIKNQKAMYY E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.17e-25M-type_MADS family protein