PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu064580.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 350aa MW: 39051.8 Da PI: 7.4578

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu064580.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00021	208	230	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H Oeu064580.1 208 YRCETCNKVFRSYQALGGHRASH 230 9***********99999998887 PP
2	zf-C2H2	11.8	0.00073	270	292	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C ++Fs+ L H r+H Oeu064580.1 270 HECPVCYRVFSSGQALGGHKRSH 292 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MEKHRCKLCF RNFANGRALG GHMRSHMMNF CAEKKEENKG KVNPFENCHQ QIDQGDDFQS 60 SSASSSSSDG EDEEREEKGI LCYGLMREKQ KGFCVSQDRE SETDSSNNKL KRVRKLRTSG 120 MKSKKSDYFE QSSEMVEPEP LSSISDTTPE ENVAYCLMML SRDKWKRKES EDEEEEEDSG 180 VVYRNLIGLL DQQKGPNKAL KTKARGKYRC ETCNKVFRSY QALGGHRASH KKIKVDLPLP 240 KVALKTRNKA NAGGGSTVAA SVEVEEEKVH ECPVCYRVFS SGQALGGHKR SHFIGAAAIS 300 SSTTSIKPFS RLGETLNIDL NLPAPIDDDE EISQVEISAI SEAVIRQPH*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MEKHRCKLCF RNFANGRALG GHMRSHMMNF CAEKKEENKG KVNPFENCHQ QIDQGDDFQS  60
SSASSSSSDG EDEEREEKGI LCYGLMREKQ KGFCVSQDRE SETDSSNNKL KRVRKLRTSG  120
MKSKKSDYFE QSSEMVEPEP LSSISDTTPE ENVAYCLMML SRDKWKRKES EDEEEEEDSG  180
VVYRNLIGLL DQQKGPNKAL KTKARGKYRC ETCNKVFRSY QALGGHRASH KKIKVDLPLP  240
KVALKTRNKA NAGGGSTVAA SVEVEEEKVH ECPVCYRVFS SGQALGGHKR SHFIGAAAIS  300
SSTTSIKPFS RLGETLNIDL NLPAPIDDDE EISQVEISAI SEAVIRQPH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	4e-47	C2H2 family protein