PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu064524.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 218aa    MW: 24835.7 Da    PI: 4.2924
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu064524.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.41e-191057249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 +i+nk   qvtfskRr g++KKA E S LC+a++a++i s+ +k++++
  Oeu064524.1 10 KIDNKNSLQVTFSKRRSGLFKKAAETSLLCGANIAILIQSPGNKFFTF 57
                 69*********************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MGRRKIEIRK IDNKNSLQVT FSKRRSGLFK KAAETSLLCG ANIAILIQSP GNKFFTFGEP  60
SVESILNRYQ FLDYSFSTES NPTAHNLLAE ERSENNEATK GFWWLNENME TMELQELEAF  120
EEKLNVLLQA GEMNRSQFFD DSLSTESNPT AHNLLVEERI ENDEATREFW GQNENLETMD  180
LQELEAFEEE LNALLQAGEM NKQIASASCS MIPLPHL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-25M-type_MADS family protein