PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu064521.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 285aa    MW: 32975.6 Da    PI: 4.1521
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu064521.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF59.34.8e-191057249
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 +i++k   qvtfskRr g++KKA E S LC+a++a++i s+ +k++++
  Oeu064521.1 10 KIDSKNSLQVTFSKRRSGLFKKAAETSLLCGANIAILIQSPGNKFFTF 57
                 6999999****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGRRKIEIRK IDSKNSLQVT FSKRRSGLFK KAAETSLLCG ANIAILIQSP GNKFFTFGEP  60
SVESILNRYQ FLDYSFSTES NPTPHNLLVE ERSENNEATR GFWWLNENME TMELQELEAF  120
EEKLKVLLQA GEMNRYQFFD DSFSTESNPT AHNLLVEERI ENDEATREFW WQNENLETMD  180
LQELEAFEEK LNVLLQAGVM NRYQFLDDSF STESNPTSHN LLVEERSEND EATREFGWEN  240
QNLEIVDLQE LEAYEEELNA LLQAGEMNKQ IASASCSMIP LPHL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-23M-type_MADS family protein