PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu064173.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 780aa    MW: 84755.6 Da    PI: 6.2371
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu064173.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS328.99.8e-1014197782374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  +++L+++ e v+ gd  laq++Larl++++sp g+p+qR+a+y +eAL+ +++++ + + ++ ++s+ s    + ++ a+k fse+sP+++f+++t+N
  Oeu064173.2 419 IDQLYKATELVQIGDPILAQEILARLNHQVSPIGKPFQRAAFYCKEALQLTIHNNNNMVPSTASASPFS---LIFKIGAYKSFSEISPLVQFANFTCN 513
                  689***************************************************777777777777777...************************** PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL..r 195
                  qa+le v g +r+H++Dfdi++G+QW++L+q+La R+eg+p l+iT++  p+++++ el+ t+e+L +fA+e++v +ef+v+  ++l++   ++L  +
  Oeu064173.2 514 QALLEVVGGFDRIHVVDFDIGYGGQWASLMQELALRREGAPALKITAFMCPSTHDQLELSLTRENLIHFANEINVVLEFEVMSIESLNSG-SWSLpfQ 610
                  *********************************************************************************866666665.5555448 PP

         GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                  v+++Ea+aVnl +     +  ++s+    + vL++vk+lsPk+vv v++ +d+ + +F +++++al+ ys l++sl+a    + ++ +k+Er ll++ 
  Oeu064173.2 611 VSENEAIAVNLPVGSLASY--QLSI----PLVLRFVKHLSPKIVVSVDRGCDRIDLPFPNHIIHALQSYSNLLESLDAV-NLNIDALQKIERLLLQPG 701
                  889*********9766665..4444....56*********************************************665.34669999********** PP

         GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  i+++v+ + ++     e+ ++Wr  + ++GF+pv++s+++++qa++++++++++g+++e+++ slvl+W+++ L+s+SaWr
  Oeu064173.2 702 IEKIVMRRFRA----PEKTQHWRTLFLSSGFSPVTFSNFTESQADCVVKRTPVQGFNIEKRQSSLVLCWQRKDLISASAWR 778
                  ******98887....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    
MKGMPLPFEF EGTGVDLELA FNNSNIRDNS SWWGSNNLNG NCVLNSSGEP TSVLDIARSP  60
SSAISSSTLS SSLGNGGGGG IAGGGASSTD TAGVAAVSGN NQKSPSLKRQ QDSTTATSSN  120
AGVVSQLLPV HPSLEIGTVA TAASGSTAGK CAMDEWESVL SESAVASPSH EQSILRLIMG  180
DVDDPEMGSL NKVLQIGTAP PPPTVEFEFN GGFGVVDQAF GTDPVAQFGS NFMHNSSSPS  240
KSSNNEKIGL FSNSSSNHSN NSKFPSSQNN MFSSVSGNLG PITTTFDSTE MKAPIFTAQT  300
LMNQHQTQYP QNQTFFFPSS YANQHEQNLF MPPQAKRHNP GTAREELEPG SQIPKGPFSV  360
PGKEPLMGKQ VQHQQPMSYQ RQLLLQQRPP RAMGPGPKTK MCEDDLAYCH LQQQQQAIID  420
QLYKATELVQ IGDPILAQEI LARLNHQVSP IGKPFQRAAF YCKEALQLTI HNNNNMVPST  480
ASASPFSLIF KIGAYKSFSE ISPLVQFANF TCNQALLEVV GGFDRIHVVD FDIGYGGQWA  540
SLMQELALRR EGAPALKITA FMCPSTHDQL ELSLTRENLI HFANEINVVL EFEVMSIESL  600
NSGSWSLPFQ VSENEAIAVN LPVGSLASYQ LSIPLVLRFV KHLSPKIVVS VDRGCDRIDL  660
PFPNHIIHAL QSYSNLLESL DAVNLNIDAL QKIERLLLQP GIEKIVMRRF RAPEKTQHWR  720
TLFLSSGFSP VTFSNFTESQ ADCVVKRTPV QGFNIEKRQS SLVLCWQRKD LISASAWRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-143GRAS family protein