PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063806.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 260aa    MW: 29809.6 Da    PI: 9.0321
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063806.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.36.3e-096186127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
      zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                 +k elC  f+r G C yGd+C++aH++
  Oeu063806.2 61 FKSELCILFQR-GKCYYGDNCHYAHSM 86
                 699********.*************95 PP

2zf-CCCH17.19.7e-061171311125
                  GTS--TTTTT-SS-S CS
      zf-CCCH  11 rtGtCkyGdrCkFaH 25 
                   +  C+yGd+C+F H
  Oeu063806.2 117 SGKGCPYGDKCQFLH 131
                  5568*********** PP

3zf-CCCH35.41.9e-11170195227
                  -S---SGGGGTS--TTTTT-SS-SSS CS
      zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                  k++lC+ + ++G C+yG +C +aHg+
  Oeu063806.2 170 KMKLCNKWEKFGSCPYGVNCVYAHGQ 195
                  899*********************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDSVHENETR SVHGVNDASN QQFFNQSNAE FGHFKKPRFS EAMRNPRVYL TINRSKLDIP  60
FKSELCILFQ RGKCYYGDNC HYAHSMSDIR NQSFNGPANG YQRNTMNKWK KCFKFSSGKG  120
CPYGDKCQFL HERVGEYRES SAISIVNGAD QIECKSLNAG QEYKRLNFRK MKLCNKWEKF  180
GSCPYGVNCV YAHGQAELQR SGCITELECA NASNAKAVAM QSSDSEQKTA RELRLQGKRC  240
FTKWNVEKIN RIYADWIES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.17e-30C3H family protein