PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063578.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 316aa    MW: 34410.7 Da    PI: 6.5522
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063578.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.00093131153123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++Cp Cgk + + ++  +H  t+
  Oeu063578.1 131 FECPVCGKGYGSEEEVSSHVETC 153
                  89*****************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDEMKDKMKG LMKKVNNPFS SPSSGKFTGQ GRVLGSSSSS SPPSSSGPAN FNATRPSQSL  60
STPKHNQSLS SNSKPATQKL SNNSEPKIED KKPAIRVDSD RNEKFENGFD PFNSLITSGK  120
RNPNGYALKV FECPVCGKGY GSEEEVSSHV ETCLDNAESC DFKDDEKENK GGKNEVEACV  180
TTYLSGNPSV GSLDVVLRLL RNIVKEPENT KFRKIRMGNP KIKDAIGDVL GGVELFEFMG  240
FELKEEAGEM WFVMDVPSEE QLGLVKNVIS LLEPNKVEKP PSAAPAPANL VEPAEPKKVD  300
RQDVNQVKCF RNSKS*