PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu063533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 101aa MW: 11328 Da PI: 5.7228 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 31.6 | 2.2e-10 | 2 | 22 | 10 | 30 |
HHHHHHHHHHHHHHHHHHHHH CS SRF-TF 10 qvtfskRrngilKKAeELSvL 30 ++tf+kRr+g++KKA+ L+vL Oeu063533.1 2 YTTFTKRRQGLFKKAKALCVL 22 69******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
MYTTFTKRRQ GLFKKAKALC VLIFSKAGNA LFFFCHPNVE SVLNRYFTYS SSSLTKDEDE 60 VVVPPIVLLE IDELEVAIQE IKHKVVARSG EIISNGEDQD * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24840.1 | 2e-11 | M-type_MADS family protein |