PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu063190.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 321aa    MW: 36599 Da    PI: 8.4373
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu063190.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.12.3e-141464148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W+++Ed +l+ + ++ G g   +W + ++++g++R++k+c++rw++yl
      Oeu063190.1 14 RGPWSPDEDAKLKAYMEKNGAGtrgNWISLPQKIGLKRCGKSCRLRWLNYL 64
                     89***********************************************97 PP
2Myb_DNA-binding43.76.4e-1471113246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eEd+l+ ++ k  G++ W+ Ia +++ gRt++++k++w++
      Oeu063190.1  71 GGFTEEEDKLICNLYKSIGSR-WSIIAGKLP-GRTDNDIKNYWNT 113
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPD EDAKLKAYME KNGAGTRGNW ISLPQKIGLK RCGKSCRLRW  60
LNYLRPNIKH GGFTEEEDKL ICNLYKSIGS RWSIIAGKLP GRTDNDIKNY WNTRLKKKLL  120
GKQHREQDAR RNYTWPQKPF AVQDSANPSQ AHPNEQEFLA SLMVQTKGER FSYDQETNYG  180
LFATSKSSIS NEIFYNTDVS FTRDKLGENS VNMLTSSNYS SFLTSSCPPM TRYYCGVDIA  240
PGTNFQEFEK IRVELEEIDY NFPQQLDGLE NFSMPEMVNS SSAYPPRISN YEAFQEIPHD  300
LSFDKSSDIA LRQEHGSSKV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65790.18e-77MYB family protein