PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062484.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 494aa MW: 55487.7 Da PI: 8.5708

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062484.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0015	9	31	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k F + +L H+r+H Oeu062484.1 9 HKCKFCSKGFASGRSLGGHMRSH 31 79********************9 PP
2	zf-C2H2	13.8	0.00018	87	105	3	21
ETTTTEEESSHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHir 21 C+ CgksF ++ L H++ Oeu062484.1 87 CKECGKSFQSWKALFGHMK 105 ******************7 PP
3	zf-C2H2	12.5	0.00043	404	426	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp+C k+F + L H r+H Oeu062484.1 404 FKCPICFKVFASGQALGGHKRSH 426 89*****************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MEEDQGLKHK CKFCSKGFAS GRSLGGHMRS HLINISSDEK LIKKKKLPTL INSKSNSDEL 60 RENPKKTNKF SKSSNDDEGS LFKDKICKEC GKSFQSWKAL FGHMKCHSVN GRNISSVEED 120 SWNGSNDHQK PDLDSESDND GLNPCRRKRS DRMIKRYNTS SSLSTIAANV SPCISEIDQQ 180 EQEEVAISLI MLSRDVSVMN SVLDQSSENN SNFLESNKIT LLNTKKSKSD EEIKTPVFPI 240 NGLKISKSHV SAYGFLEKKN LDNESEVNSP KKLIKKSGSE KFEIESNKKK KLSKRKCIVS 300 YDPQLSVPED FQEKVTYFGT SDYDFCEKKR RFECTHCHKA FSSYQALGGH RASHKKLKGC 360 CTPNNENRLD NDQILPNQSS NGKLMIDIFA MKSESEVKNI SKDFKCPICF KVFASGQALG 420 GHKRSHLIRE EKTNPSTVIE KQEPIPAGIR DFLDLNLPAP VEEDLSNDQL GLKPWWSGTS 480 SLEHELLLGL LSS*

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MEEDQGLKHK CKFCSKGFAS GRSLGGHMRS HLINISSDEK LIKKKKLPTL INSKSNSDEL  60
RENPKKTNKF SKSSNDDEGS LFKDKICKEC GKSFQSWKAL FGHMKCHSVN GRNISSVEED  120
SWNGSNDHQK PDLDSESDND GLNPCRRKRS DRMIKRYNTS SSLSTIAANV SPCISEIDQQ  180
EQEEVAISLI MLSRDVSVMN SVLDQSSENN SNFLESNKIT LLNTKKSKSD EEIKTPVFPI  240
NGLKISKSHV SAYGFLEKKN LDNESEVNSP KKLIKKSGSE KFEIESNKKK KLSKRKCIVS  300
YDPQLSVPED FQEKVTYFGT SDYDFCEKKR RFECTHCHKA FSSYQALGGH RASHKKLKGC  360
CTPNNENRLD NDQILPNQSS NGKLMIDIFA MKSESEVKNI SKDFKCPICF KVFASGQALG  420
GHKRSHLIRE EKTNPSTVIE KQEPIPAGIR DFLDLNLPAP VEEDLSNDQL GLKPWWSGTS  480
SLEHELLLGL LSS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	69	KKKKLPTLINSKSNSDELRENPKKTNK
2	328	358	KKRRFECTHCHKAFSSYQALGGHRASHKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	3e-25	C2H2 family protein