PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062477.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Nin-like

Protein Properties

Length: 790aa MW: 88523.7 Da PI: 7.2127

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062477.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.4	1.7e-29	522	572	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ Oeu062477.1 522 EKTISLQVLQQYFAGSLKDAAKNIGVCPTTLKRICRQHGITRWPSRKIKKV 572 79***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MEDGASNNTI NFNLMDELFF DGFWLETTYG SNFWQPTASN SPNLTSPRTE ANRRLWVGPS 60 RNPTRTISPK KRLVQAIEYL RDSTRDRDVL IQIWVPIKKG GRHVLTTYNQ PFSLNSNSKS 120 LAEYRDVSRN YQFAAEEDSK DLVGLPGRVF LNKLPEWTPD VRFFKREEYP RVDHAQQHNV 180 SGSLALPVFE RSSGNCLGVV EILTTSQKVP ELENVCKALE RAVRGSSDAG IYSSRWWVVA 240 VDLKSSEIPS SLKAEDCNEP YRAALTEIKD VLICVCTTHK LPLAQAWAPC IQQGKGGCRH 300 SDKNYIHCVS TIDSACYVAD PQVVGFHKAC SDHHLLKGEG IVGKAFMTNQ PCFAEDMTVF 360 CKTEYPLSHH ARMFDLRAAV AIRLRSTYTG TADFVLEFFL PPDCKDSEDQ REMLNSLSSV 420 IKQSCQSLRV VMDQELAVET SFPKSDSLES HKEEPTEEFR VTTEWDNSGM EIHYVPVSSE 480 NNIQQDSVSK GTGEGTGDFS FVSEHASSGS KRTSQKMRTK TEKTISLQVL QQYFAGSLKD 540 AAKNIGVCPT TLKRICRQHG ITRWPSRKIK KVGHSLRKLQ VVMDSVQGAE GSIQLSSFYN 600 NFPELVSPNL PGSSHLSTSK MSDHLEQLNR QPDGSLLSPG NTTSKSPSSS DETKLLVRSQ 660 SHKIISEHAS IEAPLPLPKS RSQVLHDVSN LRVKASFGEE KIRFSLQPNW GFGDLQREIF 720 RRFKIDDVNK VDLKYLDDES EWVLLTCDAD LEECIDIHKS SRRHTMKLSV NQSYHPSLGS 780 SFGSNGGPF*

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MEDGASNNTI NFNLMDELFF DGFWLETTYG SNFWQPTASN SPNLTSPRTE ANRRLWVGPS  60
RNPTRTISPK KRLVQAIEYL RDSTRDRDVL IQIWVPIKKG GRHVLTTYNQ PFSLNSNSKS  120
LAEYRDVSRN YQFAAEEDSK DLVGLPGRVF LNKLPEWTPD VRFFKREEYP RVDHAQQHNV  180
SGSLALPVFE RSSGNCLGVV EILTTSQKVP ELENVCKALE RAVRGSSDAG IYSSRWWVVA  240
VDLKSSEIPS SLKAEDCNEP YRAALTEIKD VLICVCTTHK LPLAQAWAPC IQQGKGGCRH  300
SDKNYIHCVS TIDSACYVAD PQVVGFHKAC SDHHLLKGEG IVGKAFMTNQ PCFAEDMTVF  360
CKTEYPLSHH ARMFDLRAAV AIRLRSTYTG TADFVLEFFL PPDCKDSEDQ REMLNSLSSV  420
IKQSCQSLRV VMDQELAVET SFPKSDSLES HKEEPTEEFR VTTEWDNSGM EIHYVPVSSE  480
NNIQQDSVSK GTGEGTGDFS FVSEHASSGS KRTSQKMRTK TEKTISLQVL QQYFAGSLKD  540
AAKNIGVCPT TLKRICRQHG ITRWPSRKIK KVGHSLRKLQ VVMDSVQGAE GSIQLSSFYN  600
NFPELVSPNL PGSSHLSTSK MSDHLEQLNR QPDGSLLSPG NTTSKSPSSS DETKLLVRSQ  660
SHKIISEHAS IEAPLPLPKS RSQVLHDVSN LRVKASFGEE KIRFSLQPNW GFGDLQREIF  720
RRFKIDDVNK VDLKYLDDES EWVLLTCDAD LEECIDIHKS SRRHTMKLSV NQSYHPSLGS  780
SFGSNGGPF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17150.1	0.0	Nin-like family protein