PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu062175.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 282aa    MW: 31965.3 Da    PI: 8.0472
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu062175.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.42.9e-311059251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 rienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  Oeu062175.1 10 RIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                 8***********************************************96 PP
2K-box95.67.8e-32811747100
        K-box   7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                  +s ++  +es+++e+++Lk+++e+Lqr qRhllG++L++L++++L++Le+qLe+slk+iRs++++++l+q+++lq kek++ e+nkaL++klee
  Oeu062175.1  81 NSSTQGLEESSYREYSNLKSKYESLQRYQRHLLGDELGPLNINDLEHLEHQLETSLKHIRSTRTQVMLDQLSDLQAKEKMMVENNKALERKLEE 174
                  555555678999*******************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MGRGRVELRR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST  60
SNMLQTLERY QKCSYGSLEV NSSTQGLEES SYREYSNLKS KYESLQRYQR HLLGDELGPL  120
NINDLEHLEH QLETSLKHIR STRTQVMLDQ LSDLQAKEKM MVENNKALER KLEEIYATNH  180
MQQQTWGGGD QNCAYGQQHP QSQAFFQPLE CNSTLQIGYN NPGCSSQMTG INTEVQNVNG  240
LLPGKKLLCD RGEGDGRFEV VVALAIVLVV VFKATTVATM R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.11e-109MIKC_MADS family protein