PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu062174.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 230aa MW: 26984.3 Da PI: 8.4411 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1.1e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd+ll+++v q G g+W+++a++ g++R +k+c++rw +yl Oeu062174.1 13 KGPWIPEEDKLLAEYVSQNGEGRWSSVAKCAGLNRNAKSCRLRWVNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.2e-16 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ Oeu062174.1 66 RGHITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 110 6778******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MESWSVSEKE WRKGPWIPEE DKLLAEYVSQ NGEGRWSSVA KCAGLNRNAK SCRLRWVNYL 60 RPGLKRGHIT PQEEGIIIEL HALWGNKWST IARYLPGRTD NEIKNYWRTH FKKRIKASER 120 QERRKNLLRT QQKQKEENYE DKKEEAITNE RVSFEKNDIM ELQNEILPTM YDDFMSCPDT 180 IRIDSYLWGG LWNQQINNCS KLAIQNQSNT ANSCEPDAIN IYSSGGYIY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30210.1 | 5e-75 | MYB family protein |