PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061838.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 323aa    MW: 36633.1 Da    PI: 4.8828
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061838.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.71.3e-27958150
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                 k+ien++nrqvtfskRrng++KKA+ELSvLCd++va+i+fs++g++  +s
  Oeu061838.1  9 KKIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRVNVFS 58
                 68*******************************************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MGRVKLQIKK IENTTNRQVT FSKRRNGLIK KAYELSVLCD VDVALIMFSP SGRVNVFSGN  60
RSMEEIMTRY VNLPEHERGK LQNQEYLQRA LGKFKSEADR TYQPATSSPA SVDCQLEEMQ  120
QEIFKCRCQL EDMEKKLRIY EGNSSDITTL FEAEYREQIL EQVLQDQYNS PGAQTTTQST  180
IPSQMNLPPE NINLTDLATT SANNIMDWLP QRDPQVQILN FLDSNGLLPV RDQHQGMDNI  240
QSPSLTDLHA SSVHVHSHLS SGRRIEDDTQ RPDFGQGIDV NLSPWTDLYP TGNDPFPATQ  300
PRERALLELF LSQLTAVNQD SI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.15e-49MIKC_MADS family protein