PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061799.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 426aa    MW: 48247.8 Da    PI: 7.0457
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061799.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.93.6e-127394241373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal................. 81 
                  +++lL++cAe +s +dl++a++lL+ ls+++sp+gd+++Rl++ ft+AL+ rl+r v    + l p++++++ +s+e+++                  
  Oeu061799.1  39 MRQLLISCAELISRSDLSAAHRLLSILSTNSSPYGDSTERLVHQFTKALSLRLNRYVAAADSFLIPNPSATNLVSSEATSSsnlntaefgsdetlvqs 136
                  589****************************************************9999999998888887775555444458899999999998887 PP

         GRAS  82 ..klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                     l ++v+P+++fshltaNqaIlea+eg++++Hi+Dfdi++G+QWp+L+qa+a+R  +pp+lRiTg gs    + e l++tg+rLakfA++lg++f+
  Oeu061799.1 137 syLLVNQVTPFIRFSHLTANQAILEATEGQQAIHILDFDIMHGVQWPPLMQAMAER-FPPPTLRITGTGS----DLEVLRRTGDRLAKFAHSLGLRFQ 229
                  65559**************************************************9.799**********....************************ PP

         GRAS 178 fnvl.vakrledle.leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdslea 273
                  f++l + ++ ++++  +++ + p+E+laVn+v+ lhrl++++  l+     +L+ +ks++Pkv++v+e+ea+hn++ Fl+rf+eal++y+a+fdslea
  Oeu061799.1 230 FQPLiILNNEDSISvASAILLLPDETLAVNCVHYLHRLFKDRDRLRL----FLHRIKSMNPKVFTVAEREANHNHPIFLQRFAEALDHYAAVFDSLEA 323
                  ***95444555555156789999****************66666666....*********************************************** PP

         GRAS 274 klpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                  +lp++s+er +vE+ ++grei ++va+ g++r+erhe++++W+ +l+++ F++vpls +a +qaklllr ++ s+gy+++  ++s +lgW+++pL+sv
  Oeu061799.1 324 TLPPTSHERLTVEQIWFGREIADIVAADGERRKERHERFRSWKVMLRSSDFNNVPLSPFALSQAKLLLRIHYpSEGYQLHILNDSCFLGWQNQPLFSV 421
                  ************************************************************************************************** PP

         GRAS 371 SaW 373
                  S+W
  Oeu061799.1 422 SSW 424
                  *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    
MLGSFGSSSH EEEPLPPNVH YHDNHHIQRR SFTPPAIHMR QLLISCAELI SRSDLSAAHR  60
LLSILSTNSS PYGDSTERLV HQFTKALSLR LNRYVAAADS FLIPNPSATN LVSSEATSSS  120
NLNTAEFGSD ETLVQSSYLL VNQVTPFIRF SHLTANQAIL EATEGQQAIH ILDFDIMHGV  180
QWPPLMQAMA ERFPPPTLRI TGTGSDLEVL RRTGDRLAKF AHSLGLRFQF QPLIILNNED  240
SISVASAILL LPDETLAVNC VHYLHRLFKD RDRLRLFLHR IKSMNPKVFT VAEREANHNH  300
PIFLQRFAEA LDHYAAVFDS LEATLPPTSH ERLTVEQIWF GREIADIVAA DGERRKERHE  360
RFRSWKVMLR SSDFNNVPLS PFALSQAKLL LRIHYPSEGY QLHILNDSCF LGWQNQPLFS  420
VSSWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-130GRAS family protein