PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061769.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 308aa    MW: 35734.4 Da    PI: 7.097
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061769.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.89.2e-161349541
                 SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
       SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41
                 n+  r vtf kRr+g+ KKA+ELS+LC++++ +ii+ 
  Oeu061769.1 13 NHKARRVTFEKRRKGLEKKAHELSTLCGVKIGMIIYR 49
                 7889*******************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRAKLTLEL RNNHKARRVT FEKRRKGLEK KAHELSTLCG VKIGMIIYRP AEGDEPVEPT  60
IWPENREEIE NLISSYKKRS DDDCRQKTYD LSFFFTNKVK KVQEELVKTR NKNIETKYPT  120
WDASYDNLTY DELKHFSSLL QAKIENVKSR INLMNQNQMN AQSVQENIYV YQCKLDYQQQ  180
QSLMPHGSFN MDDPRLMMMP MNDGASSSSS NYIYNAEDTY GNYTYSNGGE IRGNYIGSEI  240
PVSHGLGFGI LDNVPFPNAE MCCYLPNLYP MPQYKQFPVF SSPTLQLQVA NTEDYRQRHD  300
FQLLNPM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.15e-22M-type_MADS family protein