PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061767.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 340aa    MW: 39110.9 Da    PI: 6.1778
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061767.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.69.1e-151351543
                 SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
       SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                 n+    vtf kRr+g+ KKA+ELS+LC++++ +i++++ 
  Oeu061767.1 13 NHKACRVTFEKRRKGLEKKAYELSTLCGVKIGMILYGPA 51
                 555668******************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MGRAKLTLEL RNNHKACRVT FEKRRKGLEK KAYELSTLCG VKIGMILYGP AEGDEPVEPT  60
IWPENREEIE NLISSYKKRS DDDCRQRTYD LSFFFQNKVK KVQEELVKMR NKNIEVKYPT  120
WDASYDNLTY DELKHFSSLL QAKIENVKSR INLMNQNQMN AQSIQENIYV YQSKLYYQQQ  180
QSLMPHGSFN MADPRLMMMP MNDGASSSSS NYIYNAEDTH GDYTYSNGGE IRGNYIGSEI  240
PVSYICNAED TYGNCTYSNG GEIRGNYINS EIPVSHGLGF GVLDNVPFSN AEMCSYLPNL  300
YPMPQYSQFP VFSSPTLQLQ AADTENYRRR HDFQLHNPM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.14e-20M-type_MADS family protein