PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu061427.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 203aa MW: 22505.2 Da PI: 7.0585 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.4 | 6.8e-40 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp ++r++a+++++yeA+ar++dP yG+v++i++lqqq+ +l+a+la+l Oeu061427.1 7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLAHLPVSDRREATTTIAYEAQARLQDPTYGCVSHIFALQQQVVNLQAQLASL 104 7*************************89********************************************************************99 PP DUF260 98 kee 100 ke+ Oeu061427.1 105 KEQ 107 987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MTGSGSPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVSD 60 RREATTTIAY EAQARLQDPT YGCVSHIFAL QQQVVNLQAQ LASLKEQAAQ CIPNSSNITA 120 NPRDGLSFLQ DVQNWYSQSF QNQGMMSQFD PNLNNTTGDM PCFENQNTNL NPFVKYENSD 180 FHKDNISFGS MDSFEMLSNN RQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42440.1 | 9e-58 | LBD family protein |