PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu061296.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 342aa    MW: 39170.6 Da    PI: 7.415
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu061296.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS80.23.7e-25271341298368
         GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                  + + g+er+erhe+lekW +r++ aGF +vpls++++ qak ll+ ++sdgy+++ee+g++v gW+drpL+
  Oeu061296.1 271 LNMYGTERKERHEKLEKWAQRFDLAGFANVPLSYYTMLQAKKLLQGYNSDGYKIKEENGCVVTGWQDRPLF 341
                  66789****************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MPPKRTLHGK KKASSSTGTA RTRELAREVQ RFLNANTAAP YENIIRHWTI HAERPVKLDD  60
FPYFELVNLV QILAEVFMGL ENAWTLATTE WHQIELTPSI AILWLFMCHN IELISHRTIF  120
PDQTAGLIYH LVRGNKIDLA TLIYDQLHTL GTWRDRRSTL IFSSLISGTY RAAGVTLLSE  180
EAEHGPVPAD QEHPQVPTPQ ADVDAQLLRQ IFSTTTGISR DLCRFLQDFG AMRTELQGLQ  240
RDNHLALNYI RDARDDTAVM RREIDTMSGR LNMYGTERKE RHEKLEKWAQ RFDLAGFANV  300
PLSYYTMLQA KKLLQGYNSD GYKIKEENGC VVTGWQDRPL F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-30GRAS family protein