PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060922.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 401aa MW: 45026.7 Da PI: 9.1836

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060922.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.3	6e-16	71	130	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+++k +gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g Oeu060922.1 71 SRFRGVSRHKLTGRYEAHLWDkLSWNAtqkKKgKQVYLGAYDDEEAAARAYDLAALKYWG 130 789****************888888876447***********************98 PP
2	AP2	52.3	1.4e-16	173	224	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g Oeu060922.1 173 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 224 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MEQLNMALTM IKSDENTRRR NVRIMDSDLS PSPRCIKSRR RDTAAVALRC EGQQIKQEVG 60 PTAPTTVKRS SRFRGVSRHK LTGRYEAHLW DKLSWNATQK KKGKQVYLGA YDDEEAAARA 120 YDLAALKYWG TSTFTNFPIS DYEKEIEIMQ NVTKEEYLAS LRRKSSGFSR GVSKYRGVAR 180 HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AARAYDIAAI EYRGINAVTN FDLSTYIRWL 240 RPGANNSVSA QEPNFSQESQ ALLPPLCSCE KSLSPCSTTR AFNVDDPSKM EKSARKIPVS 300 PCRKSSSPTA LGLLLQSSIF RELVEKNSNV TEENDDKNTK SMLEVGSGDE YRGIFYDGIA 360 DIPLVFSSNG HGIELQGQVQ FNYSSADMIG NDIINMVPIC *

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MEQLNMALTM IKSDENTRRR NVRIMDSDLS PSPRCIKSRR RDTAAVALRC EGQQIKQEVG  60
PTAPTTVKRS SRFRGVSRHK LTGRYEAHLW DKLSWNATQK KKGKQVYLGA YDDEEAAARA  120
YDLAALKYWG TSTFTNFPIS DYEKEIEIMQ NVTKEEYLAS LRRKSSGFSR GVSKYRGVAR  180
HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AARAYDIAAI EYRGINAVTN FDLSTYIRWL  240
RPGANNSVSA QEPNFSQESQ ALLPPLCSCE KSLSPCSTTR AFNVDDPSKM EKSARKIPVS  300
PCRKSSSPTA LGLLLQSSIF RELVEKNSNV TEENDDKNTK SMLEVGSGDE YRGIFYDGIA  360
DIPLVFSSNG HGIELQGQVQ FNYSSADMIG NDIINMVPIC *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-82	AP2 family protein