PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060914.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 280aa MW: 31768.2 Da PI: 4.5517

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060914.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.1	1.4e-38	10	110	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 aCaaCk++rrkC++dC+lapyfpa+qpk f+nvh+lFG+sn++k+l +l++++ +edam+s++ye+++r r PvyG+ +i +l+ ql+++ +el ++ Oeu060914.1 10 ACAACKYQRRKCSSDCPLAPYFPANQPKMFQNVHRLFGVSNITKILGNLETNDqKEDAMKSIIYESDMRERFPVYGCSVIICQLRLQLQHALEELRYV 107 7**********************************************776659************************************99988 PP DUF260 98 kee 100 ++ Oeu060914.1 108 YAQ 110 665 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MTVKGGTSPA CAACKYQRRK CSSDCPLAPY FPANQPKMFQ NVHRLFGVSN ITKILGNLET 60 NDQKEDAMKS IIYESDMRER FPVYGCSVII CQLRLQLQHA LEELRYVYAQ LETYRQQFNR 120 QSTPHYSSSP QPEFGMYSNN DVSQAFQPSS LRNEMTNFGM NNQFFANENI GFYAESSDVM 180 DRPMLGFDPY CDMNNSQSIT LQAQMDAYEI PQDQEISQDF EQMHSNTLPD DRQSYIETKG 240 ACESSSESSL KDTTQSSSEQ VSQSELRNAA ACFSLCHLE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	8e-46	LBD family protein