PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu060856.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 29275.8 Da PI: 6.5404 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 126 | 176 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + k +r++lg+f ta eAaka+++a+ kl+g Oeu060856.1 126 RYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFETAVEAAKAYDRAAFKLRG 176 8********.**********9...6566*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MASLSDDCST LEIIQQHLLD DFAFMENYCP VSSFSESQIS RTSSSSSSVI SDLTTESSIF 60 KPNFSLENST NDYDFSEFET KPVKHTNFSE RKPSLNIHIP HVKKLERDST VKVVEKKVED 120 SGERKRYRGV RQRPWGKFAA EIRDPNRKGT RVWLGTFETA VEAAKAYDRA AFKLRGSKAI 180 VNFPLEITNS NPPLPENTER KRVIEEESLE RKTKVVKREE VENDKIGASP AVPLTPSSWT 240 AVWDSGDMKG IFDVPPLSP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51190.1 | 3e-50 | ERF family protein |