PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu060711.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 432aa    MW: 48389.3 Da    PI: 8.828
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu060711.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034368387323
                  ETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                  C+ CgksF  ++ L +H++ +
  Oeu060711.1 368 CSQCGKSF-KPEKLLSHMKYC 387
                  ********.*********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MKAQVSSAEV RRLHVVYFLS RSGGGVEHPH LVPVHHLSSN GVRLRDIKKW LAELRGKDMP  60
ESFAWSYKRK YRTGYIWQDL LDDDLVTPIT DNEYVLKGSE ISSPTSNKDL SYSQKKVTMQ  120
EEPLTLEEIK GHKPSCIQIH SEKSMDISSK TPSEIEEESP KFGSETSTFT NDSGELNPKP  180
EPEPEPEPEK NSDTVKQENM RVSTDSKLPR KELRNENPVP SLDSTPSNKD KKKMNNKVPM  240
EKNTKPASSA RSFTKSKSFS SGASHIFKNL ISCGAVDTND SAVVTIDRKN RPFLNMCSSD  300
ENDVHSEEIC KRGSQRTFGT LRNQQQWNGR IVEGDEEVLV IRSCDGEKDS RKQKTPLTAY  360
KQIRGPNCSQ CGKSFKPEKL LSHMKYCEGM KALAKGANPA FSASIAQTKS QRPSSKESQN  420
MDSLSGYYIT N*