PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu059966.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 671aa MW: 74342.6 Da PI: 7.0993

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu059966.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.2	6.5e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f k+lt+sd+++ g +++p+ +ae+ ++ + t+ +d +g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + +++ Oeu059966.1 121 FAKTLTQSDANNGGGFSVPRYCAETLfppldytADPPVQ--TILAKDVHGGTWKFRHIYRGTPRRHLLTTGWSAFVNHKKLVAGDSIVFL--RAENGD 214 89*******************999997556555..89*******************************************..448899 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+v+++r+ Oeu059966.1 215 LCVGIRRA 222 9**997 PP
2	Auxin_resp	108.7	6e-36	287	370	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+t+++FevvY+Prast+eF+vk++ v+ al++++ GmRfkmafet+dss+ ++ +Gt++ + +dpv+Wp+S+Wr+L+ Oeu059966.1 287 AATLAATGQPFEVVYYPRASTPEFCVKASLVKMALQMQWYSGMRFKMAFETDDSSRVSWfMGTISTAQVVDPVHWPDSPWRLLQ 370 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MRVFMEDKEK TKETERGLDS QLWHACAGSM VQMPPVNTKV LYFPQGHAEH ACGNVDFRSC 60 PRIPAYVPCR VSAIKFMADP ENDEVFAKIQ LVPVSGNDVD FDDEDVDGNS GSENTDKPAS 120 FAKTLTQSDA NNGGGFSVPR YCAETLFPPL DYTADPPVQT ILAKDVHGGT WKFRHIYRGT 180 PRRHLLTTGW SAFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKREIGAGH ETSAGWNPAC 240 GNSFMPYGGF SSFLMESENK LVRKGNQNSS GNSTGRQRVK AESVIEAATL AATGQPFEVV 300 YYPRASTPEF CVKASLVKMA LQMQWYSGMR FKMAFETDDS SRVSWFMGTI STAQVVDPVH 360 WPDSPWRLLQ VTWDEPELLQ NVRRINPWLV ELVSNMSTIH LSPFSPPQKK LRLPQHPEFS 420 LNGQYPLPAF LGGQLLGSGN LFGYLRDNTP AGMQGARQAQ YGLSLSDFYL SKLQSNFFQT 480 AISKGAFNPN TINPGNNKNV SCLQTIGNSV PTSKNSDNGK KTSFVLFGQP ILTEQQISQS 540 KSSSEGNSNK MENTSNGYGH TLHQHGTSER LSRGGFHPEL DLEASHCKVF MEYEDVGRTV 600 NLSLFGSYEE LCKKLKSMFD IDSSGILNHV FYQDVTGAVR QLGDEPFSDF TKSTRRLRIL 660 MDTNNENVGM *

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MRVFMEDKEK TKETERGLDS QLWHACAGSM VQMPPVNTKV LYFPQGHAEH ACGNVDFRSC  60
PRIPAYVPCR VSAIKFMADP ENDEVFAKIQ LVPVSGNDVD FDDEDVDGNS GSENTDKPAS  120
FAKTLTQSDA NNGGGFSVPR YCAETLFPPL DYTADPPVQT ILAKDVHGGT WKFRHIYRGT  180
PRRHLLTTGW SAFVNHKKLV AGDSIVFLRA ENGDLCVGIR RAKREIGAGH ETSAGWNPAC  240
GNSFMPYGGF SSFLMESENK LVRKGNQNSS GNSTGRQRVK AESVIEAATL AATGQPFEVV  300
YYPRASTPEF CVKASLVKMA LQMQWYSGMR FKMAFETDDS SRVSWFMGTI STAQVVDPVH  360
WPDSPWRLLQ VTWDEPELLQ NVRRINPWLV ELVSNMSTIH LSPFSPPQKK LRLPQHPEFS  420
LNGQYPLPAF LGGQLLGSGN LFGYLRDNTP AGMQGARQAQ YGLSLSDFYL SKLQSNFFQT  480
AISKGAFNPN TINPGNNKNV SCLQTIGNSV PTSKNSDNGK KTSFVLFGQP ILTEQQISQS  540
KSSSEGNSNK MENTSNGYGH TLHQHGTSER LSRGGFHPEL DLEASHCKVF MEYEDVGRTV  600
NLSLFGSYEE LCKKLKSMFD IDSSGILNHV FYQDVTGAVR QLGDEPFSDF TKSTRRLRIL  660
MDTNNENVGM *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein