PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu059818.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 313aa    MW: 35230.9 Da    PI: 4.7251
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu059818.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.2e-12145188654
                  HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Oeu059818.1 145 LMAERRRRKRLNDRLSLLRSIVPKiS------KMDRTSILGDTIDYVKEL 188
                  589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MELTQQSLLD GLMASRRDSW TTFPNDLNGV FPNCWTLEPN LDYTPELAAA NPSISGLVSQ  60
EELCNLYPFG EFQPFVDAFN SSEFSSFDNK NDIMAMPVLE EYCTRNVENE QVGFPADMTN  120
ISNVSLFAGG KSKVKKANGQ PSKNLMAERR RRKRLNDRLS LLRSIVPKIS KMDRTSILGD  180
TIDYVKELLD KIHKMQEKDM DLNTSQMKLT RNLKELNPNE TLVKNPPKFD VERRNQDTQI  240
EVRCTGKPGL LSSTLSTLDA LGFDIQQCVI SCFNDFSLQA SCYETVENQA IMSTEDVEQA  300
LFRNAGYGGR CL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148155ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-66bHLH family protein