PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu059712.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 157aa MW: 17452 Da PI: 7.3384 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 131.5 | 3.4e-41 | 12 | 110 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+l+r+C++ C +apyf +++p+kfa vhk+FGasnv+k+l+++pe++reda+sslvyeA++r+rdPvyG++g i +lq+++ +l+++l l++ Oeu059712.1 12 SCAACKLLKRRCTPTCQFAPYFRSDEPNKFAKVHKVFGASNVSKILNEVPEQQREDAVSSLVYEADVRLRDPVYGCIGAIASLQKKMVELQHDLILAR 109 6*******************************************************************************************998887 PP DUF260 99 e 99 + Oeu059712.1 110 A 110 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MKSHQEPRSG SSCAACKLLK RRCTPTCQFA PYFRSDEPNK FAKVHKVFGA SNVSKILNEV 60 PEQQREDAVS SLVYEADVRL RDPVYGCIGA IASLQKKMVE LQHDLILARA RLAYYVDQTV 120 LFSGDGVNMC PVIDMVEASN GQDCLSFDHF SQFPFP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11090.1 | 2e-61 | LBD family protein |