PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu059315.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 367aa MW: 39713.2 Da PI: 8.4731

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu059315.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.8e-24	89	133	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ Oeu059315.1 89 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKPVEN 133 79****************************************997 PP
2	QLQ	64.1	3.5e-22	28	62	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa Q+q+L++Q+++yKyL+a++PvPp+L+ +i+ Oeu059315.1 28 PFTAVQWQELEHQAMIYKYLVAGLPVPPDLVIPIR 62 9********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MSGTGSTSVA VGMGGAGGEL GYVRYRPPFT AVQWQELEHQ AMIYKYLVAG LPVPPDLVIP 60 IRHSLEALSA RFFPHPSSGC CSYFGKKFDP EPGRCRRTDG KKWRCSKDAH PDSKYCERHM 120 HRGRNRSRKP VENQSTSQSL STAMTDITSG SSGNGGSYQT GGSVSFQNMP LYSASSEGLS 180 FGSNVTKLQM EPVSHGINNK EYRYIHGLAP DADRNTLSPE APGSMGGLKL GSGVGSGSWY 240 LTTSQLPSSP SLKQKSDSQF LGHSSPQLHM PHAFVPIDTM MSKQHQQHCL FGSDIGSPGP 300 AKQEQHSVHP FFSEWPTAKE SWSNLDDNEP NKNTFSTTQL SISIPRASSE FSSGSGCSPN 360 GEFQKL*

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MSGTGSTSVA VGMGGAGGEL GYVRYRPPFT AVQWQELEHQ AMIYKYLVAG LPVPPDLVIP  60
IRHSLEALSA RFFPHPSSGC CSYFGKKFDP EPGRCRRTDG KKWRCSKDAH PDSKYCERHM  120
HRGRNRSRKP VENQSTSQSL STAMTDITSG SSGNGGSYQT GGSVSFQNMP LYSASSEGLS  180
FGSNVTKLQM EPVSHGINNK EYRYIHGLAP DADRNTLSPE APGSMGGLKL GSGVGSGSWY  240
LTTSQLPSSP SLKQKSDSQF LGHSSPQLHM PHAFVPIDTM MSKQHQQHCL FGSDIGSPGP  300
AKQEQHSVHP FFSEWPTAKE SWSNLDDNEP NKNTFSTTQL SISIPRASSE FSSGSGCSPN  360
GEFQKL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	8e-49	GRF family protein