PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu059064.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 674aa    MW: 75452.4 Da    PI: 6.877
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu059064.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS434.29.5e-1332906571373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  lv+lL++c+ea++ ++ +++++++arl elasp+g+++ RlaayfteALa r++r +++++++  p+e +++  +++ +al++++evsP++kf h+t 
  Oeu059064.1 290 LVNLLVACVEAIRLKNIANISHIMARLGELASPRGSTICRLAAYFTEALALRISRLWPHIFHITIPRELDQM-DDTSGTALRILNEVSPFPKFIHFTS 386
                  689*************************************************************99999855.555668899**************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  N+ +l+a++g++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTgvg+    sk+el etg+rLa fA+ l++pfef+  v+++led++l++L+v
  Oeu059064.1 387 NEILLRAFDGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGVGE----SKQELIETGNRLAGFAAVLNLPFEFHH-VVDKLEDVRLWMLHV 479
                  ***************************************************....***************************.7************** PP

         GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellgre 293
                  k++E++aVn+v+q+h+ll +s+  +   +++L l++s++P vvv++eqea+hn++ + +rf+++l+yysa+fdsl + +lp++s  rik+E++ ++re
  Oeu059064.1 480 KEDETVAVNCVFQMHKLLYDSTGRTL--RDFLGLIRSTNPAVVVMSEQEAEHNDTMLERRFSNSLKYYSAIFDSLdSISLPADSPLRIKMEEM-FARE 574
                  ******************88877766..89*********************************************8899**************.**** PP

         GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve...eesgslvlgWkdrpLvsvSaW 373
                  i+n++aceg++r+erhet+ kWr+ +e+ GF+   +s+++  q ++ll++++ + yrve   ++ ++l+lgW d+pL++vSaW
  Oeu059064.1 575 IRNIIACEGRDRIERHETFWKWRQLMEQGGFQCSGFSDRELLQGQMLLKMYSCENYRVEkqgQDGNALTLGWLDQPLYTVSAW 657
                  ****************************************************999****5555588999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 674 aa     Download sequence    
MLAGCSSTLL SPRHRLRSEA SGQFQVCHLP SMSTQRLDLP CSFGRKDAPR SSQSIRPVGI  60
SVENPIEAKT TNCSLRQNIK LPPSAKTEGR RESKDKFWEK SKKKRYAEEV SYDEEIGMNR  120
VKKKRCSGRF HDSEEGGGNL SIGHLGGGNF WFHPGFDVPR SIPPAGPSPP QVPFSITCSG  180
EEERVCFVPS DVMSPPLPPL SSSPWLEPIG DKITRLGDKN AETSQGRAQE GSRSSSTSSE  240
SGRLVLRLIE NPGEHETGNG SRPPNPSDSV ENVAGHNGEN NHREHFDIEL VNLLVACVEA  300
IRLKNIANIS HIMARLGELA SPRGSTICRL AAYFTEALAL RISRLWPHIF HITIPRELDQ  360
MDDTSGTALR ILNEVSPFPK FIHFTSNEIL LRAFDGKDRV HIIDFDIKQG LQWPSLFQSL  420
ASRTNPPSHV RITGVGESKQ ELIETGNRLA GFAAVLNLPF EFHHVVDKLE DVRLWMLHVK  480
EDETVAVNCV FQMHKLLYDS TGRTLRDFLG LIRSTNPAVV VMSEQEAEHN DTMLERRFSN  540
SLKYYSAIFD SLDSISLPAD SPLRIKMEEM FAREIRNIIA CEGRDRIERH ETFWKWRQLM  600
EQGGFQCSGF SDRELLQGQM LLKMYSCENY RVEKQGQDGN ALTLGWLDQP LYTVSAWAPV  660
DIAGSSSSYS QPT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102125KKKRYAEEVSYDEEIGMNRVKKKR
2103126KKKRYAEEVSYDEEIGMNRVKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein