PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058915.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 270aa    MW: 30530.7 Da    PI: 9.0607
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058915.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.61.2e-31959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  Oeu058915.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                 79***********************************************96 PP
2K-box904.5e-301202011697
        K-box  16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                  s+qqe+ kLk+++e Lqr+qR+llGedL++L+ keL++Le+qL+ slk+iRsk+++ +l+ + +lq+ke +l+e+n++L++ 
  Oeu058915.1 120 SSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLESQLDMSLKQIRSKRTQAMLDTLTDLQRKELALNEANRSLKQW 201
                  68*****************************************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS  60
SSILKTLDRY QKCNYGAPEP NISATEALVG TSTRYNKIEN EGRRFVRVTL GHMAVTADLS  120
SQQEYLKLKA RYEALQRSQR NLLGEDLGPL NSKELESLES QLDMSLKQIR SKRTQAMLDT  180
LTDLQRKELA LNEANRSLKQ WLIESNQVSL QWNPIAQDQD HVSYGRPPAA QPQTTDPFFH  240
PLECEPTLHI GYSDPTAGPS VNYVSGWLP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.11e-116MIKC_MADS family protein