PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058667.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 599aa MW: 67624.8 Da PI: 5.9925

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058667.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.3	3.9e-13	62	120	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GV++++++gr++A+++d s+ n k+ k+++lg ++ +e A + ++ a++k++g Oeu058667.1 62 IFRGVTRHRWTGRFEAHLWDKSIwNSiqnKKgKQIYLGAYDNEESAGRTYDLAALKYWG 120 69****************777788876447***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MKRPPPPPPP PPPLSYSSSS SSSSCINSPK TQKKLKPKRI RAKKIQNAAA DSVVSTKSRS 60 SIFRGVTRHR WTGRFEAHLW DKSIWNSIQN KKGKQIYLGA YDNEESAGRT YDLAALKYWG 120 PGTPLNFPLE MYSIEIEEMQ RLTKEEYLAS LRRQSSGFSR GVSKYRGVAR EEDDFERNRC 180 FDHDSLDESP GIAIKISCDL LKISWTSSGS TQRESQGYPI LRAQAHKRKP QQHMIWEEAA 240 AAYDMAAIEF RGPNAVTNFD ISKYTDKLKK FAPEVEVKEE DVQVMNQETL EIVPQTQGDE 300 AINLQYHRNH QQEEFNQMVR QSVPKLELID SIDSDAMVMM DPTEDIEHHP WYDMCLDSDL 360 NSLQIPNIPL DEPNELLGLL DDKGFEDNID FIFDDSFNEN EFHQDAMSGT TAGSKDVEAD 420 VFEGRDEKGR DASLTSSSPP STTTSVGSNI WWAYYCSSSC PTNSNRKWGS IGGGLELSQP 480 VELPVISSGQ YPLKRLRVSR FLKGAEYEIV NSDQRDLCWT NGGRTHNQQV GAPPVVRRVG 540 RRRVAVVQKR LDDFAPTFNL HLLIRIAIFA ESLGRIVVAL KQQIRISLDY TDSDTSAL*

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MKRPPPPPPP PPPLSYSSSS SSSSCINSPK TQKKLKPKRI RAKKIQNAAA DSVVSTKSRS  60
SIFRGVTRHR WTGRFEAHLW DKSIWNSIQN KKGKQIYLGA YDNEESAGRT YDLAALKYWG  120
PGTPLNFPLE MYSIEIEEMQ RLTKEEYLAS LRRQSSGFSR GVSKYRGVAR EEDDFERNRC  180
FDHDSLDESP GIAIKISCDL LKISWTSSGS TQRESQGYPI LRAQAHKRKP QQHMIWEEAA  240
AAYDMAAIEF RGPNAVTNFD ISKYTDKLKK FAPEVEVKEE DVQVMNQETL EIVPQTQGDE  300
AINLQYHRNH QQEEFNQMVR QSVPKLELID SIDSDAMVMM DPTEDIEHHP WYDMCLDSDL  360
NSLQIPNIPL DEPNELLGLL DDKGFEDNID FIFDDSFNEN EFHQDAMSGT TAGSKDVEAD  420
VFEGRDEKGR DASLTSSSPP STTTSVGSNI WWAYYCSSSC PTNSNRKWGS IGGGLELSQP  480
VELPVISSGQ YPLKRLRVSR FLKGAEYEIV NSDQRDLCWT NGGRTHNQQV GAPPVVRRVG  540
RRRVAVVQKR LDDFAPTFNL HLLIRIAIFA ESLGRIVVAL KQQIRISLDY TDSDTSAL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-67	AP2 family protein