PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu057786.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

E2F/DP

Protein Properties

Length: 360aa MW: 38966.2 Da PI: 7.274

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu057786.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.6	1.8e-27	106	188	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg Oeu057786.1 106 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVTEfadpnnniaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 188 689******...*999***************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MVNNSNNTTN QEDGGKNPSG ISRGIGGGGG AAKSWGTTGS GQSVSTSGSV GSPSSRSETA 60 AATPASDNTF LRLNNLDIQG DDAGSQGATG NKKKKRGQRA AGGDKSGRGL RQFSMKVCEK 120 VESKGRTTYN EVADELVTEF ADPNNNIASP DQQQYDEKNI RRRVYDALNV LMAMDIISKD 180 KKEIQWKGLP RTSLNDIEEL KNESLGIRNR IEKKAAYLQE LEEQYVGLQK LVQRNEQLYG 240 LGNAPSGGVA LPFILVQTRP HATVEVEISE DMQLVHFDFN STPFELHDDN YVLKAMKLCD 300 NPQGDGVTQN IPLHGGESSH MPSMYQPQPS HPSRSNISGR PPNSPPVPGI LKARVKHEH*

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MVNNSNNTTN QEDGGKNPSG ISRGIGGGGG AAKSWGTTGS GQSVSTSGSV GSPSSRSETA  60
AATPASDNTF LRLNNLDIQG DDAGSQGATG NKKKKRGQRA AGGDKSGRGL RQFSMKVCEK  120
VESKGRTTYN EVADELVTEF ADPNNNIASP DQQQYDEKNI RRRVYDALNV LMAMDIISKD  180
KKEIQWKGLP RTSLNDIEEL KNESLGIRNR IEKKAAYLQE LEEQYVGLQK LVQRNEQLYG  240
LGNAPSGGVA LPFILVQTRP HATVEVEISE DMQLVHFDFN STPFELHDDN YVLKAMKLCD  300
NPQGDGVTQN IPLHGGESSH MPSMYQPQPS HPSRSNISGR PPNSPPVPGI LKARVKHEH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-143	E2F/DP family protein